STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
RO6060 kDa SS-A/Ro ribonucleoprotein isoform X1. (536 aa)    
Predicted Functional Partners:
SSB
Lupus La protein.
    
 
 0.944
COG3
Conserved oligomeric Golgi complex subunit 3.
    
   0.731
HSPA4
Heat shock 70 kDa protein 4 isoform X1.
      
 0.646
LARP7
La-related protein 7.
    
 
 0.609
ENSPVIP00000001890
annotation not available
    
 
 0.579
AGO2
Eukaryotic translation initiation factor 2C.
    
 
 0.579
PUF60
Poly(U)-binding-splicing factor PUF60 isoform X1.
    
 
 0.579
PRIMPOL
DNA-directed primase/polymerase protein isoform X1.
      
 0.571
FIP1L1
Pre-mRNA 3'-end-processing factor FIP1 isoform X1.
      
 0.567
RNASEH2B
Ribonuclease H2 subunit B isoform X1.
      
 0.565
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.