STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC110079358acyl-CoA-binding domain-containing protein 5-like. (514 aa)    
Predicted Functional Partners:
PUM2
Pumilio RNA binding family member 2.
   
   0.726
PUM1
Pumilio homolog 1 isoform X1.
   
   0.726
RPS27A
Ribosomal protein S27a.
   
 0.726
SCP2
Non-specific lipid-transfer protein.
   
 0.722
LOC110072527
Ubiquitin-large subunit ribosomal protein L40e.
   
 0.620
LOC110072526
Ubiquitin-large subunit ribosomal protein L40e.
   
 0.620
ACOX3
Peroxisomal acyl-coenzyme A oxidase 3.
   
 0.593
HSDL2
Hydroxysteroid dehydrogenase-like protein 2.
   
 0.586
ACOX2
3alpha,7alpha,12alpha-trihydroxy-5beta-cholestanoyl-CoA 24-hydroxylase.
   
 0.576
ACOX1
Peroxisomal acyl-coenzyme A oxidase 1 isoform X1.
   
 0.576
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.