Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
MIF4GDMIF4G domain-containing protein. (222 aa)    
Predicted Functional Partners:
SLBP
Stem-loop binding protein.
    
 
 0.625
LOC110077196
Oocyte-specific histone RNA stem-loop-binding protein 2-like.
    
 
 0.625
ZCCHC17
Nucleolar protein of 40 kDa.
    
 
 0.573
FNTA
Protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha.
      
 0.566
ENSPVIP00000014941
annotation not available
    
   0.555
DDX25
ATP-dependent RNA helicase DDX25.
    
   0.555
ENSPVIP00000023327
annotation not available
    
   0.555
LOC110072622
ATP-dependent RNA helicase DDX19/DBP5.
    
   0.555
SRP72
Signal recognition particle subunit SRP72.
      
 0.498
RNMT
MRNA cap guanine-N7 methyltransferase.
      
 0.479
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
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