STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TNRTenascin-R isoform X1. (1356 aa)    
Predicted Functional Partners:
ACAN
Aggrecan core protein isoform X1.
   
 0.959
ITGB6
Integrin beta 6.
    
0.946
ITGB1
Integrin beta-1 isoform X1.
    
0.944
ITGA9
Integrin alpha 9.
    
 0.941
ITGA8
Integrin alpha 8.
    
 0.939
ITGAV
Integrin alpha V.
    
 0.939
SDC1
Syndecan 1.
     
 0.901
SDC4
Syndecan 4.
     
 0.901
VTN
Vitronectin isoform X1.
    
 0.889
PLAU
Urokinase-type plasminogen activator.
   
  0.887
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.