STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HIRAProtein HIRA-like. (839 aa)    
Predicted Functional Partners:
CABIN1
Calcineurin-binding protein cabin-1.
   
 0.998
UBN1
Ubinuclein-1 isoform X1.
    
 0.996
ASF1A
Histone chaperone ASF1A.
    
 0.995
ASF1B
Histone chaperone ASF1B.
    
 0.957
ENSPVIP00000029753
annotation not available
    
 0.957
RBBP4
Histone-binding protein RBBP4 isoform X1.
    
 
 0.833
TLK2
Serine/threonine-protein kinase tousled-like 2 isoform X1.
    
 
 0.757
LOC110078097
WD repeat-containing protein 73-like.
    
 
 0.713
CHAF1B
Chromatin assembly factor 1 subunit B isoform X1.
    
 
 0.695
POLR2A
DNA-directed RNA polymerase II subunit RPB1.
   
   0.656
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.