Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSPVIP00000001200annotation not available (112 aa)    
Predicted Functional Partners:
EIF3B
Eukaryotic translation initiation factor 3 subunit B.
   
 
 0.677
PRPF6
pre-mRNA processing factor 6.
   
 0.676
EFTUD2
116 kDa U5 small nuclear ribonucleoprotein component.
   
 0.674
EIF3G
Eukaryotic translation initiation factor 3 subunit G.
   
 
 0.671
USP9X
Probable ubiquitin carboxyl-terminal hydrolase FAF-X.
   
 
 0.652
DDX6
Probable ATP-dependent RNA helicase DDX6.
   
 
 0.627
ATP5F1B
F-type H+-transporting ATPase subunit beta.
   
 
 0.625
NCBP2
Nuclear cap-binding protein subunit 2.
    
 0.625
EIF3A
Eukaryotic translation initiation factor 3 subunit A.
   
 
 0.617
NCBP1
Nuclear cap-binding protein subunit 1.
   
 0.614
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
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