STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCPEP1Retinoid-inducible serine carboxypeptidase. (437 aa)    
Predicted Functional Partners:
EXOSC2
Exosome complex component RRP4.
     
 0.599
NEU1
Sialidase-1 isoform X1.
   
 0.570
PTTG1IP
Pituitary tumor-transforming gene 1 protein-interacting protein.
      
 0.563
AHDC1
AT-hook DNA binding motif containing 1.
      
 0.473
PSMA5
Proteasome subunit alpha type-5.
      
 0.443
ERLEC1
Endoplasmic reticulum lectin 1.
   
 
 0.440
OS9
OS9 endoplasmic reticulum lectin.
   
 
 0.440
GLB1
Beta-galactosidase.
   
 0.422
GLB1L
Beta-galactosidase-1-like protein isoform X1.
   
 0.422
BOD1
Biorientation of chromosomes in cell division protein 1.
   
 0.418
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.