Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
BEAN1Brain expressed associated with NEDD4 1. (267 aa)    
Predicted Functional Partners:
ZNF608
Zinc finger protein 608.
      
 0.696
PYURF
Protein preY, mitochondrial.
      
 0.696
TUBGCP4
Gamma-tubulin complex component 4 isoform X1.
      
 0.696
CMTM3
CKLF-like MARVEL transmembrane domain-containing protein 3.
      
 0.691
C9orf72
Guanine nucleotide exchange protein C9orf72.
      
 0.631
MRPL55
39S ribosomal protein L55, mitochondrial.
      
 0.629
CCNDBP1
Cyclin-D1-binding protein 1.
      
 0.624
CMTM4
CKLF-like MARVEL transmembrane domain-containing protein 4 isoform X1.
      
 0.617
LOC110088038
Tripartite motif-containing protein 7-like.
      
 0.616
TK2
Thymidine kinase 2, mitochondrial.
      
 0.597
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
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