STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
COILCoilin isoform X1. (635 aa)    
Predicted Functional Partners:
NCOR1
Nuclear receptor corepressor 1 isoform X1.
   
 0.790
ENSPVIP00000010849
annotation not available
   
 0.790
NCOR2
Nuclear receptor corepressor 2.
   
 0.790
HDAC2
Histone deacetylase 2 isoform X1.
   
 0.726
HDAC1
Histone deacetylase 1/2.
   
 0.726
HDAC3
Histone deacetylase 3 isoform X1.
   
 0.726
HDAC8
Histone deacetylase 8 isoform X1.
   
 0.726
SMN1
Survival motor neuron protein.
    
 0.720
NOLC1
Nucleolar and coiled-body phosphoprotein 1 isoform X1.
   
 
 0.656
TGS1
Trimethylguanosine synthase isoform X1.
   
 0.649
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.