STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PDGFRLPlatelet-derived growth factor receptor-like protein. (374 aa)    
Predicted Functional Partners:
PDGFB
Platelet-derived growth factor subunit B isoform X1.
   
 0.633
VEGFC
Vascular endothelial growth factor C/D.
    
 0.632
GRB2
Growth factor receptor-binding protein 2.
   
 0.628
NRP2
Neuropilin-2 isoform X1.
     
 0.599
NRP1
Neuropilin-1 isoform X1.
    
 0.577
RASA1
Ras GTPase-activating protein 1.
    
 0.568
PDGFRB
Platelet-derived growth factor receptor beta.
   
0.553
GFRA3
GDNF family receptor alpha 3.
    
 0.536
KITLG
KIT ligand.
    
 0.513
PIK3R3
Phosphatidylinositol 3-kinase regulatory subunit gamma isoform X1.
    
 0.508
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.