STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RAB3CRas-related protein Rab-3C isoform X1. (244 aa)    
Predicted Functional Partners:
RIMS2
Regulating synaptic membrane exocytosis 2.
    
 0.947
SNAP25
Synaptosomal-associated protein 25 isoform X1.
   
 0.679
SWSAP1
ATPase SWSAP1.
      
 0.679
MED16
Mediator of RNA polymerase II transcription subunit 16.
      
 0.679
CASK
Calcium/calmodulin dependent serine protein kinase.
    
 0.674
SYT1
Synaptotagmin-1.
   
 0.669
SYT2
Synaptotagmin-2 isoform X1.
   
 0.669
SYT5
Synaptotagmin-5.
   
 0.664
SLC18A3
Solute carrier family 18 member A3.
   
 
 0.658
MADD
MAP kinase activating death domain.
    
 0.613
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.