Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
NUP85Nuclear pore complex protein Nup85. (736 aa)    
Predicted Functional Partners:
SEC13
Protein transport protein SEC13.
    
 0.999
NUP43
Nuclear pore complex protein Nup43.
   
 0.999
NUP37
Nucleoporin 37.
   
 0.999
NUP133
Nuclear pore complex protein Nup133 isoform X1.
   
 0.999
SEH1L
Nucleoporin SEH1 isoform X1.
   
 0.999
NUP160
Nuclear pore complex protein Nup160 isoform X1.
   
 0.999
NUP107
Nuclear pore complex protein Nup107 isoform X1.
   
 0.999
NUP98
Nuclear pore complex protein Nup98-Nup96 isoform X1.
   
 0.998
NUP153
Nuclear pore complex protein Nup153 isoform X1.
    
 0.997
NUP93
Nuclear pore complex protein Nup93 isoform X1.
   
 0.997
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
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