Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
TK2Thymidine kinase 2, mitochondrial. (207 aa)    
Predicted Functional Partners:
TK1
Thymidine kinase, cytosolic.
  
 
 0.983
DTYMK
Thymidylate kinase isoform X1.
  
 
 0.973
TYMS
Thymidylate synthase.
  
 
 0.966
TYMP
Thymidine phosphorylase isoform X1.
    
 0.966
DCTD
dCMP deaminase.
   
 0.964
DUT
Deoxyuridine 5'-triphosphate nucleotidohydrolase, mitochondrial.
   
 
 0.952
UPP1
Uridine phosphorylase 1-like.
     
 0.941
UPP2
Uridine phosphorylase 2 isoform X1.
     
 0.941
CMPK1
UMP-CMP kinase.
     
 0.938
NT5M
5'(3')-deoxyribonucleotidase, mitochondrial.
     
 0.932
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
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