Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
DEKProtein DEK. (382 aa)    
Predicted Functional Partners:
BAZ1B
Bromodomain adjacent to zinc finger domain protein 1B.
   
 0.966
UPF1
Regulator of nonsense transcripts 1 isoform X1.
    
 
 0.938
SF3B1
Splicing factor 3B subunit 1 isoform X1.
   
 0.896
MYBBP1A
Myb-binding protein 1A.
    
 0.885
DDX21
ATP-dependent RNA helicase DDX21.
   
 0.828
DAXX
Death domain-associated protein 6 isoform X1.
    
 
 0.819
MYO1C
Unconventional myosin-Ic.
    
 0.819
GCAT
2-amino-3-ketobutyrate coenzyme A ligase, mitochondrial.
    
   0.734
SRRM1
Serine/arginine repetitive matrix protein 1 isoform X1.
   
 
 0.713
SMARCA1
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 1.
   
  0.705
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
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