STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DEKProtein DEK. (382 aa)    
Predicted Functional Partners:
UPF1
Regulator of nonsense transcripts 1 isoform X1.
    
 
 0.952
SF3B1
Splicing factor 3B subunit 1 isoform X1.
   
 
 0.942
MYBBP1A
Myb-binding protein 1A.
     
 0.921
BAZ1B
Bromodomain adjacent to zinc finger domain protein 1B.
    
 0.912
ERCC6
DNA excision repair protein ERCC-6 isoform X1.
    
 0.911
DDX21
ATP-dependent RNA helicase DDX21.
     
 0.899
MYO1C
Unconventional myosin-Ic.
     
 0.707
SMARCA1
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 1.
   
 0.698
SMARCA5
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5.
   
 0.698
ZGRF1
Zinc finger GRF-type containing 1.
    
 
 0.695
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.