STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC110091560HLA class II histocompatibility antigen, DRB1-11 beta chain-like. (271 aa)    
Predicted Functional Partners:
CD74
HLA class II histocompatibility antigen gamma chain isoform X1.
   
 0.891
LOC110084638
T-cell surface glycoprotein CD4-like isoform X1.
   
 0.747
ENSPVIP00000005947
SLA class II histocompatibility antigen, DQ haplotype D alpha chain-like.
   
 0.651
LOC110091135
Class II histocompatibility antigen, M alpha chain.
   
 0.610
RPS14
Small subunit ribosomal protein S14e.
   
 0.536
ENSPVIP00000000888
annotation not available
   
  0.458
LOC110090814
RLA class II histocompatibility antigen, DP alpha-1 chain-like.
   
  0.458
ENSPVIP00000014318
RLA class II histocompatibility antigen, DP alpha-1 chain-like.
   
  0.458
INS
Insulin.
    
 
 0.406
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.