Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
DCUN1D4DCN1-like protein 4 isoform X1. (292 aa)    
Predicted Functional Partners:
CUL1
Cullin-1 isoform X1.
   
 0.943
CUL2
Cullin-2 isoform X1.
   
 0.935
UBE2F
NEDD8-conjugating enzyme UBE2F isoform X1.
    
 0.847
CUL3
Cullin-3 isoform X1.
   
 0.844
ARHGAP24
Rho GTPase-activating protein 24 isoform X1.
      
 0.822
CUL5
Cullin-5 isoform X1.
   
 0.816
NEDD8
Ubiquitin-like protein Nedd8.
    
 0.771
RBX1
E3 ubiquitin-protein ligase RBX1.
   
 0.769
DCAF5
DDB1- and CUL4-associated factor 5.
     
 0.748
DCAF8
DDB1 and CUL4 associated factor 8.
     
 0.714
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
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