Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSPVIP00000001304Cytoglobin-2-like isoform X1. (160 aa)    
Predicted Functional Partners:
SERPING1
Plasma protease C1 inhibitor isoform X1.
   
    0.919
CYB5B
Cytochrome b5 type B.
   
 
 0.671
CYB5A
Cytochrome b5.
   
 
 0.671
ADGB
Androglobin.
   
 
 0.660
NGB
Neuroglobin.
      
 0.631
APAF1
Apoptotic protease-activating factor 1.
     
 0.626
EPOR
Erythropoietin receptor isoform X1.
   
  
 0.610
MB
Myoglobin.
      
 0.572
CYB5R4
Cytochrome b5 reductase 4 isoform X1.
   
 0.569
IGFBP3
Insulin-like growth factor-binding protein 3.
      
 0.508
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
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