STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PDIA4Protein disulfide-isomerase A4 isoform X1. (641 aa)    
Predicted Functional Partners:
HSPA5
Endoplasmic reticulum chaperone BiP.
   
 0.995
HSP90B1
Heat shock protein 90kDa beta.
   
 0.992
ERO1B
ERO1-like protein beta.
   
 0.981
ERO1A
ERO1-like protein alpha.
   
 0.980
PDIA3
Protein disulfide-isomerase A3.
   
   0.974
HYOU1
Hypoxia up-regulated protein 1-like isoform X1.
   
 0.966
LOC110076170
Calreticulin-like.
   
 0.948
CALR
Calreticulin.
   
 0.948
PPIB
Peptidyl-prolyl cis-trans isomerase B (cyclophilin B).
   
 0.937
CANX
Calnexin isoform X1.
   
 0.870
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.