Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
JPT1Hematological and neurological expressed 1 protein. (156 aa)    
Predicted Functional Partners:
JPT2
Hematological and neurological expressed 1-like protein.
   
  
 0.582
TRIM33
E3 ubiquitin-protein ligase TRIM33.
    
   0.513
ENSPVIP00000002641
annotation not available
    
   0.513
TRIM28
Transcription intermediary factor 1-beta.
    
   0.513
ENSPVIP00000021266
Basic salivary proline-rich protein 4-like.
      
 0.438
GTSE1
G-2 and S-phase expressed protein 1.
      
 0.436
STMN1
Stathmin.
   
 
 0.434
MN1
MN1 proto-oncogene, transcriptional regulator.
      
 0.430
DNAAF3
Dynein assembly factor 3, axonemal isoform X1.
      
 0.429
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
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