Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
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Co-occurrence
Co-expression
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[Homology]
Score
LOC110085823Armadillo repeat-containing protein 7-like isoform X1. (222 aa)    
Predicted Functional Partners:
RBM48
RNA-binding protein 48 isoform X1.
  
 
 
 0.933
SCNM1
Sodium channel modifier 1.
    
 
 0.773
CRIPT
Cysteine-rich PDZ-binding protein.
    
 
 0.738
PHF5A
PHD finger-like domain-containing protein 5A.
    
   0.734
SNRPB
Small nuclear ribonucleoprotein-associated protein B-like.
    
   0.734
PPIL2
Peptidyl-prolyl cis-trans isomerase-like 2.
    
 
 0.734
SNW1
SNW domain-containing protein 1.
    
   0.734
CRNKL1
Crooked neck pre-mRNA splicing factor 1.
    
   0.734
SF3B6
Pre-mRNA branch site protein p14.
    
   0.734
SNRPD1
Small nuclear ribonucleoprotein Sm D1.
    
   0.734
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
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