STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC110085823Armadillo repeat-containing protein 7-like isoform X1. (222 aa)    
Predicted Functional Partners:
RBM48
RNA-binding protein 48 isoform X1.
  
 
 
 0.897
GPKOW
G patch domain and KOW motifs-containing protein isoform X1.
   
   0.695
SCNM1
Sodium channel modifier 1.
    
 
 0.692
CRIPT
Cysteine-rich PDZ-binding protein.
    
 
 0.685
PPIL2
Peptidyl-prolyl cis-trans isomerase-like 2.
    
 
 0.682
PHF5A
PHD finger-like domain-containing protein 5A.
    
   0.680
SNRPB
Small nuclear ribonucleoprotein-associated protein B-like.
    
   0.680
SNW1
SNW domain-containing protein 1.
    
   0.680
CRNKL1
Crooked neck pre-mRNA splicing factor 1.
    
   0.680
SF3B6
Pre-mRNA branch site protein p14.
    
   0.680
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.