Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
SPATA18Mitochondria-eating protein isoform X1. (411 aa)    
Predicted Functional Partners:
RSPH14
Radial spoke head 14 homolog.
   
  
 0.741
CCIN
Calicin.
   
  
 0.704
SYT13
Synaptotagmin-13.
      
 0.694
TEX43
Testis-expressed protein 43.
      
 0.693
LRRC23
Leucine-rich repeat-containing protein 23.
   
  
 0.692
RRAD
Ras-related associated with diabetes.
      
 0.691
CD81
CD81 antigen.
      
 0.688
TSPAN8
Tetraspanin-8 isoform X1.
      
 0.686
SHISA6
Protein shisa-6 homolog isoform X1.
      
 0.662
PSMG2
Proteasome assembly chaperone 2.
      
 0.657
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
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