STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MRPL2839S ribosomal protein L28, mitochondrial. (235 aa)    
Predicted Functional Partners:
MRPL4
39S ribosomal protein L4, mitochondrial.
   
 
 0.954
MRPL16
39S ribosomal protein L16, mitochondrial.
   
 0.949
MRPS18A
39S ribosomal protein S18a, mitochondrial.
   
   0.944
GADD45GIP1
Growth arrest and DNA damage-inducible proteins-interacting protein 1.
   
   0.944
MRPL41
39S ribosomal protein L41, mitochondrial.
   
   0.941
MRPL47
39S ribosomal protein L47, mitochondrial.
    
 
 0.937
MRPL3
39S ribosomal protein L3, mitochondrial isoform X1.
   
 
 0.937
MRPL9
39S ribosomal protein L9, mitochondrial.
   
   0.937
MRPL40
39S ribosomal protein L40, mitochondrial.
   
   0.935
MRPL13
39S ribosomal protein L13, mitochondrial.
   
 
 0.934
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.