STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MRPL2839S ribosomal protein L28, mitochondrial. (235 aa)    
Predicted Functional Partners:
MRPL16
39S ribosomal protein L16, mitochondrial.
   
 0.977
MALSU1
Mitochondrial assembly of ribosomal large subunit protein 1.
   
  0.976
MRPL2
39S ribosomal protein L2, mitochondrial.
   
 0.972
MRPL3
39S ribosomal protein L3, mitochondrial isoform X1.
   
 0.971
MRPL41
39S ribosomal protein L41, mitochondrial.
   
  0.970
MRPL9
39S ribosomal protein L9, mitochondrial.
   
  0.968
MRPL58
Peptidyl-tRNA hydrolase ICT1, mitochondrial.
   
  0.967
MRPL47
39S ribosomal protein L47, mitochondrial.
   
 0.967
MRPL44
39S ribosomal protein L44, mitochondrial.
   
  0.967
MRPL50
39S ribosomal protein L50, mitochondrial.
   
 0.967
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.