Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
PAMPeptidylglycine monooxygenase / peptidylamidoglycolate lyase. (968 aa)    
Predicted Functional Partners:
RASSF9
Ras association domain-containing protein 9 isoform X1.
    
 
 0.792
UHMK1
Serine/threonine-protein kinase Kist.
    
 
 0.661
CYB561
Cytochrome b-561.
      
 0.637
TOR2A
Prosalusin.
      
 0.621
LOC110083017
Kalirin.
    
 
 0.619
GDNF
Glial cell derived neurotrophic factor.
      
 0.613
INS
Insulin.
      
 0.612
NEFL
Neurofilament light polypeptide isoform X1.
      
 0.610
CPE
Carboxypeptidase E isoform X1.
   
  
 0.610
BET1
Blocked early in transport 1.
      
 0.569
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
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