STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCFD2Sec1 family domain-containing protein 2. (688 aa)    
Predicted Functional Partners:
VPS11
Vacuolar protein sorting-associated protein 11 homolog isoform X1.
   
 
  0.889
ZW10
Centromere/kinetochore protein zw10 homolog.
    
 
 0.830
RINT1
RAD50-interacting protein 1 isoform X1.
   
 
 0.810
NBAS
Neuroblastoma-amplified sequence.
    
 
 0.809
STX18
Syntaxin-18 isoform X1.
    
 
 0.796
VPS33B
Vacuolar protein sorting-associated protein 33B isoform X1.
   
 
  0.657
VPS33A
Vacuolar protein sorting-associated protein 33A.
   
 
  0.647
USE1
Unconventional SNARE in the endoplasmic reticulum protein 1.
   
   0.580
COG4
Conserved oligomeric Golgi complex subunit 4.
      
 0.531
NAPG
Gamma-soluble NSF attachment protein.
    
   0.527
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.