STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CRIM1Cysteine-rich motor neuron 1 protein. (881 aa)    
Predicted Functional Partners:
FAU
Ubiquitin-like protein fubi and ribosomal protein S30.
   
  0.888
RANBP2
RanBP2-like and GRIP domain-containing protein 4 isoform X1.
   
 
 0.570
FEZ2
Fasciculation and elongation protein zeta-2 isoform X1.
      
 0.563
TMEM159
Promethin.
      
 0.560
GLE1
GLE1 RNA export mediator.
    
 0.555
GP1BA
Platelet glycoprotein Ib alpha chain.
    
 0.552
KCNS1
Potassium voltage-gated channel delayed-rectifier subfamily S member 1.
   
 
 0.549
RPS28
Small subunit ribosomal protein S28e.
   
  0.542
RPS19
Small subunit ribosomal protein S19e.
   
 0.537
NUP214
Nucleoporin 214.
    
 0.537
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.