STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CRIM1Cysteine-rich motor neuron 1 protein. (881 aa)    
Predicted Functional Partners:
FEZ2
Fasciculation and elongation protein zeta-2 isoform X1.
      
 0.693
SEMA3G
Semaphorin-3G.
     
 0.628
KCNS1
Potassium voltage-gated channel delayed-rectifier subfamily S member 1.
   
 
 0.620
NUP214
Nucleoporin 214.
    
 0.611
OMA1
Metalloendopeptidase OMA1, mitochondrial.
      
 0.596
FAU
Ubiquitin-like protein fubi and ribosomal protein S30.
   
  0.591
NUP98
Nuclear pore complex protein Nup98-Nup96 isoform X1.
    
 0.583
BMP3
Bone morphogenetic protein 3.
    
 0.581
NUP43
Nuclear pore complex protein Nup43.
    
 0.576
TMEM159
Promethin.
      
 0.571
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.