STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CDR2LCerebellar degeneration-related protein 2-like. (463 aa)    
Predicted Functional Partners:
CDT1
Chromatin licensing and DNA replication factor 1.
   
   0.841
RPUSD2
RNA pseudouridylate synthase domain-containing protein 2.
    
   0.650
SIKE1
Suppressor of IKBKE 1 isoform X1.
    
   0.617
FGFR1OP2
FGFR1 oncogene partner 2 isoform X1.
    
   0.617
GMNN
Geminin isoform X1.
    
   0.574
KLHL14
Kelch-like protein 14.
      
 0.564
TCHP
Trichoplein keratin filament-binding protein.
    
   0.556
STC2
Stanniocalcin-2.
      
 0.503
MNS1
Meiosis specific nuclear structural 1.
    
 
 0.496
KRTCAP2
Keratinocyte-associated protein 2.
      
 0.479
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.