Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
MMDMonocyte to macrophage differentiation factor isoform X1. (256 aa)    
Predicted Functional Partners:
ADK
Adenosine kinase-like isoform X1.
      
 0.669
SPO11
Meiotic recombination protein SPO11 isoform X1.
      
 0.666
PHF11
PHD finger protein 11.
      
 0.601
APPL2
DCC-interacting protein 13-beta.
    
 
 0.509
APPL1
DCC-interacting protein 13 alpha.
    
 
 0.509
EFCAB2
EF-hand calcium-binding domain-containing protein 2.
      
 0.481
BANK1
B-cell scaffold protein with ankyrin repeats isoform X1.
      
 0.439
PAQR3
Progestin and adipoQ receptor family member 3.
      
 0.434
SDHAF3
Succinate dehydrogenase assembly factor 3, mitochondrial.
     
  0.424
SDHAF1
Succinate dehydrogenase assembly factor 1, mitochondrial.
     
  0.424
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
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