STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SAP18Histone deacetylase complex subunit SAP18. (153 aa)    
Predicted Functional Partners:
RNPS1
RNA-binding protein with serine-rich domain 1 isoform X1.
   
 0.998
ACIN1
Apoptotic chromatin condensation inducer in the nucleus.
   
 0.997
PNN
Pinin.
    
 0.996
MAGOH
Protein mago nashi homolog.
   
 0.977
SUDS3
Sin3 histone deacetylase corepressor complex component SDS3.
    
 0.973
RBBP4
Histone-binding protein RBBP4 isoform X1.
   
 
 0.973
EIF4A3
Eukaryotic initiation factor 4A-III.
   
 0.967
RBM8A
RNA-binding protein 8A.
   
 0.932
ARID4B
AT-rich interactive domain-containing protein 4B isoform X1.
   
 0.915
RBM39
RNA-binding protein 39 isoform X1.
   
 0.910
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.