STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SAP18Histone deacetylase complex subunit SAP18. (153 aa)    
Predicted Functional Partners:
ACIN1
Apoptotic chromatin condensation inducer in the nucleus.
   
 0.999
RNPS1
RNA-binding protein with serine-rich domain 1 isoform X1.
   
 0.999
PNN
Pinin.
    
 0.998
ARID4A
AT-rich interactive domain-containing protein 4A isoform X1.
   
 
 0.978
ALYREF
THO complex subunit 4.
   
 
 0.978
ARID4B
AT-rich interactive domain-containing protein 4B isoform X1.
   
 
 0.978
SUDS3
Sin3 histone deacetylase corepressor complex component SDS3.
     
 0.965
EIF4A3
Eukaryotic initiation factor 4A-III.
   
 0.961
MAGOH
Protein mago nashi homolog.
   
 0.956
RBM8A
RNA-binding protein 8A.
   
 0.950
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.