Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CUL1Cullin-1 isoform X1. (776 aa)    
Predicted Functional Partners:
SKP1
S-phase kinase-associated protein 1.
   
 0.999
RBX1
E3 ubiquitin-protein ligase RBX1.
    
 0.999
FBXW11
F-box/WD repeat-containing protein 11 isoform X1.
    
 0.999
BTRC
F-box/WD repeat-containing protein 1A isoform X1.
    
 0.998
SKP2
F-box and leucine-rich repeat protein 1 (S-phase kinase-associated protein 2).
    
 0.998
FBXO5
F-box only protein 5.
    
 0.996
FBXL5
F-box and leucine-rich repeat protein 5.
    
 0.992
NEDD8
Ubiquitin-like protein Nedd8.
    
 0.992
COPS5
COP9 signalosome complex subunit 5.
   
 0.988
CCNF
F-box protein 1 (cyclin F).
    
 0.982
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
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