Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
MRPL57Ribosomal protein 63, mitochondrial. (173 aa)    
Predicted Functional Partners:
MRPL1
39S ribosomal protein L1, mitochondrial isoform X1.
    
 
 0.941
MRPL52
39S ribosomal protein L52, mitochondrial.
   
 
 0.935
MRPL50
39S ribosomal protein L50, mitochondrial.
   
 
 0.930
GADD45GIP1
Growth arrest and DNA damage-inducible proteins-interacting protein 1.
   
   0.925
MRPL28
39S ribosomal protein L28, mitochondrial.
    
   0.923
MRPL41
39S ribosomal protein L41, mitochondrial.
   
 
 0.914
MRPL47
39S ribosomal protein L47, mitochondrial.
   
 
 0.913
ENSPVIP00000011407
annotation not available
   
  0.910
NDUFAB1
NADH dehydrogenase (ubiquinone) 1 alpha/beta subcomplex 1, acyl-carrier protein.
   
  0.910
MRPS30
39S ribosomal protein S30, mitochondrial.
   
   0.908
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
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