STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PLAGL2Zinc finger protein PLAGL2. (484 aa)    
Predicted Functional Partners:
GHSR
Growth hormone secretagogue receptor type 1.
    
 
 0.651
EIF2AK3
Eukaryotic translation initiation factor 2-alpha kinase 3 isoform X1.
    
 0.646
CDX1
Homeobox protein CDX1/4.
    
 
 0.636
ENC1
Kelch-like protein 25/37 (ectoderm-neural cortex protein).
    
 0.627
LURAP1
Leucine rich adaptor protein 1.
      
 0.617
TCF7
Transcription factor 7 isoform X1.
    
 
 0.601
POFUT1
GDP-fucose protein O-fucosyltransferase 1.
   
  
 0.600
RIPK4
Receptor-interacting serine/threonine-protein kinase 4.
    
 0.591
CD74
HLA class II histocompatibility antigen gamma chain isoform X1.
    
 0.578
SLITRK6
SLIT and NTRK-like protein 6.
    
 0.575
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.