STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CA10Carbonic anhydrase-related protein 10. (328 aa)    
Predicted Functional Partners:
LYSMD1
LysM and putative peptidoglycan-binding domain-containing protein 1.
    
   0.734
REM2
Rad and Gem related GTP binding protein 2.
      
 0.664
REM1
GTP-binding protein REM 1.
      
 0.632
PSMG2
Proteasome assembly chaperone 2.
    
 
 0.590
BRD7
Bromodomain-containing protein 7.
      
 0.573
PSMG1
Proteasome assembly chaperone 1.
    
   0.549
NRBP2
Nuclear receptor-binding protein 2.
    
   0.547
CA6
Carbonic anhydrase 6.
  
   
0.547
UTP18
U3 small nucleolar RNA-associated protein 18 homolog isoform X1.
   
  
 0.544
RPF2
Ribosome production factor 2 homolog isoform X1.
   
 
 0.533
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.