Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSPVIP00000001522annotation not available (441 aa)    
Predicted Functional Partners:
RAB1A
Ras-related protein Rab-1A.
    
 0.712
RAB1B
Ras-related protein Rab-1B.
    
 0.712
LOC110075697
Ras-related protein ORAB-1-like isoform X1.
    
 0.712
RAB3GAP1
Rab3 GTPase-activating protein catalytic subunit isoform X1.
      
 0.623
TBC1D21
TBC1 domain family member 21.
   
  
 0.574
TBC1D7
TBC1 domain family member 7-like.
      
 0.573
RAB19
Ras-related protein Rab-19.
    
 0.573
RAB43
Ras-related protein Rab-43.
    
 0.573
TBC1D16
TBC1 domain family member 16 isoform X1.
      
 0.571
REEP2
Receptor expression-enhancing protein 1/2/3/4.
      
 0.569
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
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