STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
REC114Meiotic recombination protein REC114. (269 aa)    
Predicted Functional Partners:
TTF2
Transcription termination factor 2 isoform X1.
  
 
 0.959
XRCC1
DNA repair protein XRCC1 isoform X1.
   
 0.903
LIG3
DNA ligase 3.
   
 0.843
MED10
Mediator of RNA polymerase II transcription subunit 10.
     
 0.811
LIG4
DNA ligase 4 isoform X1.
   
 0.747
POLL
DNA polymerase lambda isoform X1.
    
 0.725
POLB
DNA polymerase beta.
    
 0.725
WRN
Werner syndrome ATP-dependent helicase isoform X1.
   
 
 0.719
NEIL1
Endonuclease VIII-like 1.
     
 0.713
RAD51B
DNA repair protein RAD51 homolog 2.
   
 
 0.708
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.