Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
NDNFProtein NDNF. (570 aa)    
Predicted Functional Partners:
NEUROD6
Neurogenic differentiation factor 6.
      
 0.569
EGFL6
Epidermal growth factor-like protein 6 isoform X1.
      
 0.564
SNCG
Gamma-synuclein isoform X1.
      
 0.524
PARM1
Prostate androgen-regulated mucin-like protein 1 isoform X1.
      
 0.436
TSKU
Tsukushi (leucine-rich repeat-containing protein 54).
      
 0.436
PLCH2
Phospholipase C eta 2.
      
 0.436
CHMP2B
Charged multivesicular body protein 2B.
      
 0.418
FAM53A
Protein FAM53A isoform X1.
      
 0.418
VIPR2
Vasoactive intestinal polypeptide receptor 2.
      
 0.401
VASH2
Tubulinyl-Tyr carboxypeptidase.
      
 0.400
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
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