Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
TNIP3TNFAIP3-interacting protein 3 isoform X1. (421 aa)    
Predicted Functional Partners:
TNFAIP3
Tumor necrosis factor alpha-induced protein 3 isoform X1.
   
 0.977
OPTN
Optineurin.
   
 
 0.868
LOC110076953
Tumor necrosis factor receptor superfamily member 1A-like isoform X1.
    
 
 0.865
UBC
Polyubiquitin-C.
    
   0.737
NFKB1
Nuclear factor NF-kappa-B p105 subunit isoform X1.
   
 
 0.709
NFKB2
Nuclear factor of kappa light polypeptide gene enhancer in B-cells 2.
   
 
 0.709
TAX1BP1
Tax1 binding protein 1.
    
 
 0.679
MYD88
Myeloid differentiation primary response protein MyD88.
    
 
 0.632
RB1CC1
RB1-inducible coiled-coil protein 1 isoform X1.
    
   0.632
VCPIP1
Deubiquitinating protein VCIP135.
   
 0.505
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
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