Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSPVIP00000001604annotation not available (103 aa)    
Predicted Functional Partners:
RPLP0
Large subunit ribosomal protein LP0.
   
 0.996
RPL5
Large subunit ribosomal protein L5e.
   
 0.994
RPL14
Large subunit ribosomal protein L14e.
   
 0.994
RPL30
Large subunit ribosomal protein L30e.
   
 0.994
RPL8
Large subunit ribosomal protein L8e.
   
 0.994
RPL11
60S ribosomal protein L11 isoform X1.
   
 0.994
ENSPVIP00000028682
annotation not available
   
 0.994
RPL12
Large subunit ribosomal protein L12e.
   
 0.993
RPL38
Large subunit ribosomal protein L38e.
   
 0.991
RPL15
Large subunit ribosomal protein L15e.
   
 0.991
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
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