STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RBL1Retinoblastoma-like protein 1. (1006 aa)    
Predicted Functional Partners:
E2F5
Transcription factor E2F5 isoform X1.
   
 0.990
E2F4
Transcription factor E2F4 isoform X1.
   
 0.990
TFDP2
Transcription factor Dp-2 isoform X1.
   
 0.986
TFDP1
Transcription factor Dp-1 isoform X1.
   
 0.986
CCNE1
G1/S-specific cyclin-E1.
   
 0.980
CCNE2
G1/S-specific cyclin-E1.
   
 0.980
E2F3
Transcription factor E2F3.
   
 0.977
ENSPVIP00000022730
Transcription factor E2F2-like isoform X1.
   
 0.977
CCND3
G1/S-specific cyclin-D3.
    
 0.972
CCND1
G1/S-specific cyclin-D1.
    
 0.972
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.