STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PHF2Lysine-specific demethylase PHF2. (1083 aa)    
Predicted Functional Partners:
SKP1
S-phase kinase-associated protein 1.
    
 0.716
SUV39H1
Histone-lysine N-methyltransferase SUV39H1 isoform X1.
    
 0.630
ARID5B
AT-rich interactive domain-containing protein 5B isoform X1.
     
 0.621
RING1
E3 ubiquitin-protein ligase RNF1/2.
    
 0.582
RNF2
E3 ubiquitin-protein ligase RNF1/2.
    
 0.582
SETD2
[histone H3]-dimethyl-L-lysine36 N-methyltransferase.
   
 0.517
YAF2
YY1-associated factor 2.
    
 0.514
RYBP
RING1 and YY1-binding protein.
    
 0.514
SIRT1
Sirtuin 1.
    
 0.507
LOC110075730
Histone H3.3-like.
    
 0.504
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.