STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PHF2Lysine-specific demethylase PHF2. (1083 aa)    
Predicted Functional Partners:
SUV39H1
Histone-lysine N-methyltransferase SUV39H1 isoform X1.
    
 0.744
ARID5B
AT-rich interactive domain-containing protein 5B isoform X1.
    
 0.685
SKP1
S-phase kinase-associated protein 1.
    
 0.659
JARID2
Protein Jumonji isoform X1.
   
 0.565
KDM6A
Lysine-specific demethylase 6A isoform X1.
   
 0.560
KDM5A
[histone H3]-trimethyl-L-lysine4 demethylase.
   
 0.540
KMT5A
[histone H4]-lysine20 N-methyltransferase SETD8.
    
 0.506
JMJD1C
Probable JmjC domain-containing histone demethylation protein 2C isoform X1.
   
 
 0.501
SIRT1
Sirtuin 1.
    
 
 0.494
LOC110075730
Histone H3.3-like.
    
 0.488
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
Server load: low (38%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.