STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC110091562H-2 class II histocompatibility antigen, A-R alpha chain-like. (262 aa)    
Predicted Functional Partners:
CD74
HLA class II histocompatibility antigen gamma chain isoform X1.
   
 0.958
LOC110084638
T-cell surface glycoprotein CD4-like isoform X1.
     
  0.902
LOC110091135
Class II histocompatibility antigen, M alpha chain.
  
0.715
LOC110091149
Class II histocompatibility antigen, M beta 1 chain.
   
0.622
LOC110071721
Class II histocompatibility antigen, M beta 1 chain-like.
   
0.622
RPS14
Small subunit ribosomal protein S14e.
   
 0.600
MRPS11
28S ribosomal protein S11, mitochondrial.
   
 0.512
ENSPVIP00000005947
SLA class II histocompatibility antigen, DQ haplotype D alpha chain-like.
  
 
0.487
LOC110090814
RLA class II histocompatibility antigen, DP alpha-1 chain-like.
  
 
0.487
RPA2
Replication protein A 32 kDa subunit.
   
 
  0.472
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.