STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CRNKL1Crooked neck pre-mRNA splicing factor 1. (711 aa)    
Predicted Functional Partners:
PRPF19
Pre-mRNA-processing factor 19.
   
 0.999
SNW1
SNW domain-containing protein 1.
  
 0.999
BUD31
Bud site selection protein 31.
    
 0.999
CDC40
Pre-mRNA-processing factor 17.
   
 0.999
SF3B1
Splicing factor 3B subunit 1 isoform X1.
   
 0.999
CDC5L
Cell division cycle 5-like protein.
   
 0.999
CWC15
Spliceosome-associated protein CWC15 homolog.
    
 0.999
XAB2
Pre-mRNA-splicing factor SYF1.
   
0.999
SYF2
Pre-mRNA-splicing factor SYF2.
    
 0.999
RBM22
Pre-mRNA-splicing factor RBM22/SLT11.
   
 0.999
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.