Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CLUL1Clusterin-like protein 1. (454 aa)    
Predicted Functional Partners:
C1S
Complement component 1, s subcomponent.
     
 0.651
VTN
Vitronectin isoform X1.
   
 
 0.624
XRCC6
X-ray repair cross-complementing protein 6 isoform X1.
    
 
 0.576
APP
Amyloid beta precursor protein.
    
 0.567
RBP3
Retinol-binding protein 3.
   
  
 0.512
ADIPOQ
Adiponectin.
      
 0.512
CFP
Complement factor properdin.
      
 0.468
LOC110071310
Apolipoprotein A-IV-like isoform X1.
   
 
 0.449
BAX
Apoptosis regulator BAX-like isoform X1.
    
 
 0.445
HPX
Hemopexin.
   
 
 0.441
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
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