STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KLHL40Kelch repeat and BTB domain-containing protein 5/10. (622 aa)    
Predicted Functional Partners:
BBS1
Bardet-Biedl syndrome 1 protein.
    
 0.902
BBS7
Bardet-Biedl syndrome 7 protein isoform X1.
   
 0.881
BBS4
Bardet-Biedl syndrome 4 protein isoform X1.
    
 0.879
BBS2
Bardet-Biedl syndrome 2 protein.
    
 0.874
TTC8
Tetratricopeptide repeat protein 8 isoform X1.
   
 0.862
ENSPVIP00000010380
annotation not available
   
 0.814
LOC110088761
Bardet-Biedl syndrome 9 protein.
   
 0.814
CUL3
Cullin-3 isoform X1.
    
 0.765
BBIP1
BBSome-interacting protein 1 isoform X1.
    
 0.733
KBTBD13
Kelch repeat and BTB domain-containing protein 13.
   
0.726
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.