Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
LOC110084827Casein kinase II subunit alpha-like. (407 aa)    
Predicted Functional Partners:
CSNK2B
Casein kinase II subunit beta isoform X1.
   
 0.931
SSRP1
Structure-specific recognition protein 1.
    
 0.824
TP53
Cellular tumor antigen p53.
    
 0.823
SUPT16H
FACT complex subunit SPT16.
   
 0.822
PCGF5
Polycomb group RING finger protein 5 isoform X1.
    
 0.820
PCGF3
Polycomb group RING finger protein 3.
    
 0.788
AUTS2
Autism susceptibility gene 2 protein.
    
 0.770
RRP7A
Ribosomal RNA-processing protein 7 homolog A.
   
 0.712
NOL6
U3 small nucleolar RNA-associated protein 22.
    
 0.700
FBRS
Fibrosin.
    
 0.698
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
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