Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
GPTAlanine aminotransferase 1. (634 aa)    
Predicted Functional Partners:
GOT2
Aspartate aminotransferase, mitochondrial isoform X1.
   
 
 0.970
GOT1L1
Putative aspartate aminotransferase, cytoplasmic 2.
   
 0.958
GOT1
Aspartate aminotransferase, cytoplasmic.
   
 0.958
GLUD1
Glutamate dehydrogenase 1, mitochondrial.
  
 
 0.950
AGXT
Alanine-glyoxylate transaminase / serine-glyoxylate transaminase / serine-pyruvate transaminase.
  
 0.950
LOC110077649
Glutamate dehydrogenase, mitochondrial-like isoform X1.
  
 
 0.950
AGXT2
Alanine-glyoxylate transaminase / (R)-3-amino-2-methylpropionate-pyruvate transaminase.
   
 0.937
SDHA
Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial.
     
 0.919
LDHB
L-lactate dehydrogenase B chain.
  
 0.911
LOC110088549
L-lactate dehydrogenase A chain.
  
 0.911
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
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