STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PPP1R16AProtein phosphatase 1 regulatory subunit 16A isoform X1. (538 aa)    
Predicted Functional Partners:
PPP1CB
Serine/threonine-protein phosphatase PP1-beta catalytic subunit.
   
 0.708
PPP1CC
Serine/threonine-protein phosphatase PP1-gamma catalytic subunit.
   
 0.660
PPP1CA
Serine/threonine-protein phosphatase PP1-alpha catalytic subunit.
   
 0.660
DHX35
Probable ATP-dependent RNA helicase DHX35 isoform X1.
   
 0.479
CDKN2D
Cyclin-dependent kinase 4 inhibitor D isoform X1.
  
     0.473
GPT2
Alanine aminotransferase 2.
 
 
   0.464
NFKBIA
NF-kappa-B inhibitor alpha.
  
     0.452
NFKBIE
NF-kappa-B inhibitor epsilon.
  
     0.445
ENSPVIP00000024833
annotation not available
     
 0.445
ANKRD39
Ankyrin repeat domain-containing protein 39.
  
     0.437
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
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