STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
USP11Ubiquitin specific peptidase 11. (944 aa)    
Predicted Functional Partners:
RNF123
Ring finger protein 123.
   
 0.767
USP7
Ubiquitin carboxyl-terminal hydrolase 7.
   
0.743
NFKBIA
NF-kappa-B inhibitor alpha.
     
 0.681
USP1
Ubiquitin carboxyl-terminal hydrolase 1.
    
 
0.680
UBA7
Ubiquitin like modifier activating enzyme 7.
   
 
 0.644
BRCA2
Breast cancer type 2 susceptibility protein.
    
 
 0.620
MYSM1
Histone H2A deubiquitinase MYSM1 isoform X1.
   
 
 0.619
USP30
Ubiquitin specific peptidase 30.
   
 
 0.593
YARS1
Tyrosine--tRNA ligase, cytoplasmic.
      
 0.590
UBC
Polyubiquitin-C.
    
 0.571
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.