STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
USP11Ubiquitin specific peptidase 11. (944 aa)    
Predicted Functional Partners:
USP7
Ubiquitin carboxyl-terminal hydrolase 7.
   
 0.985
NFKBIA
NF-kappa-B inhibitor alpha.
     
 0.940
TP53
Cellular tumor antigen p53.
    
 0.917
UBC
Polyubiquitin-C.
    
 0.902
RAE1
MRNA export factor isoform X1.
    
   0.849
RNF123
Ring finger protein 123.
   
 0.843
WRAP53
Telomerase Cajal body protein 1.
    
 0.812
ZUP1
Zinc finger with UFM1-specific peptidase domain protein isoform X1.
   
 
 0.804
XPC
Xeroderma pigmentosum group C-complementing protein.
   
 
 0.804
EIF4B
Eukaryotic translation initiation factor 4B.
   
 
 0.793
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.