STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCNDBP1Cyclin-D1-binding protein 1. (322 aa)    
Predicted Functional Partners:
TFPT
TCF3 fusion partner.
    
   0.870
INO80E
INO80 complex subunit E.
    
   0.852
RPLP0
Large subunit ribosomal protein LP0.
   
   0.851
SYF2
Pre-mRNA-splicing factor SYF2.
    
 
 0.750
CCND1
G1/S-specific cyclin-D1.
    
 
 0.706
TMEM62
Transmembrane protein 62.
    
 
 0.694
MRPL55
39S ribosomal protein L55, mitochondrial.
      
 0.677
GRAP2
GRB2-related adapter protein 2 isoform X1.
    
 
 0.667
BEAN1
Brain expressed associated with NEDD4 1.
      
 0.624
NFRKB
Nuclear factor related to kappa-B-binding protein isoform X1.
    
   0.616
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.