STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DENND3DENN domain-containing protein 3 isoform X1. (1268 aa)    
Predicted Functional Partners:
RAB12
Ras-related protein Rab-12.
    
 0.902
ULK1
Unc-51 like autophagy activating kinase 1.
    
 0.876
ULK2
Unc-51 like autophagy activating kinase 2.
    
  0.674
RAB28
Ras-related protein Rab-28 isoform X1.
    
 0.669
SEC14L1
SEC14-like protein 1 isoform X1.
      
 0.646
NCLN
Nicalin isoform X1.
      
 0.642
TBATA
Protein TBATA.
      
 0.629
PIK3CD
Phosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit delta isoform isoform X1.
   
  
 0.609
LMOD1
Leiomodin-1 isoform X1.
      
 0.606
SLC45A4
Solute carrier family 45 member 4 isoform X1.
      
 0.572
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
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