Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
GRIK2Glutamate receptor ionotropic, kainate 2 isoform X1. (859 aa)    
Predicted Functional Partners:
GRIK5
Glutamate receptor ionotropic, kainate 5.
   
 0.639
GRIK4
Glutamate ionotropic receptor kainate type subunit 4.
   
 0.639
KCNG1
Potassium voltage-gated channel subfamily G member 1.
   
  
 0.573
NETO2
Neuropilin and tolloid-like protein 2.
    
 
 0.524
BRAF
B-Raf proto-oncogene serine/threonine-protein kinase.
    
 
 0.481
PICK1
PRKCA-binding protein.
   
 0.471
CCDC113
Coiled-coil domain-containing protein 113.
   
 
 0.465
SUMO1
Small ubiquitin-related modifier 1.
    
 
 0.460
RAD21
Double-strand-break repair protein rad21 homolog.
    
 
 0.456
LOC110070682
Disks large homolog 2-like.
    
 0.449
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
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